List of sequenced animal genomes
This list of sequenced animal genomes contains animal species for which complete genome sequences have been assembled, annotated and published. Substantially complete draft genomes are included, but not partial genome sequences or organelle-only sequences. For all kingdoms, see the list of sequenced genomes.
For the far more abundant mitochondrial genomes, see list of sequenced animal mitochondrial genomes.
Porifera (Sponges)
Amphimedon queenslandica, a sponge Stylissa carteri Ephydatia muelleriCtenophora
Mnemiopsis leidyi, Hormiphora californensis Pleurobrachia bachei- Bolinopsis microptera
Cnidaria
Hydra vulgaris,, a model hydrozoan Nematostella vectensis, a model sea anemone Aiptasia pallida, a sea anemone Renilla muelleri, an octocoral Stylophora pistillata, a coral Aurelia aurita, moon jellyfish Clytia hemisphaerica, Hydrozoan jellyfish Myxobolus honghuensis Nemopilema nomurai, Nomura jellyfish Rhopilema esculentum, Flame jellyfish Cassiopea xamachana Alatina alata Calvadosia cruxmelitensis Dendronephthya gigantea, an octocoral- Acropora acuminata
- Acropora awi
- Acropora cytherea, Table coral
- Acropora digitifera, a coral
- Acropora echinata
- Acropora florida, branching staghorn coral
- Acropora gemmifera
- Acropora hyacinthus, Brush coral
- Acropora intermedia, Noble Staghorn Coral
- Acropora microphthalma
- Acropora muricata, Staghorn coral
- Acropora nasta, branching staghorn coral
- Acropora pulchra
- Acropora selago, Green Selago Acropora
- Acropora tenuis, Purple Tipped Acropora
- Acropora yongei,Yonge's staghorn coral
- Corallium rubrum, Precious coral
- Astreopora myriophthalma, Porous star coral
- Lophelia pertusa, Deepwater White Coral
- Montipora cactus
- Montipora capitata, Rice coral
- Montipora efflorescens, Velvet coral
- Orbicella faveolata, mountainous star coral
- Paragorgia papillata, Bubble-gum coral
- Pocillopora acuta, Hosoeda Hanayasai coral
- Pocillopora damicornis, cauliflower coral
- Pocillopora meandrina, Cauliflower coral
- Porites astreoides, Mustard hill coral
- Porites compressa, Finger coral
Echinodermata
Acanthaster planci, starfish Apostichopus japonicus, sea cucumber Arbacia lixula, black sea urchin Astropecten irregularis, sand sea star Australostichopus mollis, Australian sea cucumber Chiridota hydrothermica, deep sea cucumber Diadema setosum, Long-spined sea urchin Echinometra lucunter, rock boring urchin Ophionereis fasciata, mottled brittlestar- Patiriella regularis, the New Zealand common cushion star Plazaster borealis, Octopus starfish Strongylocentrotus purpuratus, a sea urchin and model deuterostome
Tunicates
Appendicularia
Order Copelata">Larvacean">Copelata (Larvaceans)
Oikopleura dioica, a larvacean.Acopa
Thaliacea
Order Pyrosomida">Pyrosome">Pyrosomida (Pyrosomes)
Order [Salpida] (Salps)
Order [Doliolida]
Enterogona
Order [Phlebobranchia]
- Ciona intestinalis, a tunicate Ciona savignyi, a tunicate
| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Order [Aplousobranchia]
Vertebrates
Cartilaginous fish
Holocephali
Order Chimaeriformes">Chimaera">Chimaeriformes (Chimeras)
Selachimorpha (True Sharks)
- Superorder Galeomorphi
- * Order Carcharhiniformes
- ** Scyliorhinus torazame, Cloudy catshark
- * Order Lamniformes
- ** Carcharodon carcharias, Great white shark
- * Order Orectolobiformes
- ** Chiloscyllium plagiosum, Whitespotted bamboo shark
- ** Chiloscyllium punctatum, Brownbanded bamboo shark
- ** Rhincodon typus, Whale shark
Batomorphi (Rays)
- Order Myliobatiformes
- * Potamotrygon leopoldi, Xingu river ray
- Order Rajiformes
- * Leucoraja erinacea, Little skate
Ray-Finned Fish
Cladistia
- Order Polypteriformes
- * Polypterus senegalus, Senegal bichir,
Chondrostei
- Order Acipenseriformes
- * Polyodon spathula, American paddlefish,
Holostei
- Order Amiiformes
- * Amia calva, Bowfin,
- Order Lepisosteiformes
- * Atractosteus spatula, Alligator gar,
- * Lepisosteus oculatus, Spotted gar
Teleostei
- Order Anabantiformes
- *Betta splendens, Siamese fighting fish
- * Helostoma temminkii, Kissing gourami
- Order Anguilliformes
- * Anguilla anguilla, European Eel
- * Anguilla japonica, Japanese Eel
- Order Atheriniformes
- * Atherinopsis californiensis, Jack silverside
- Order Beloniformes
- * Oryzias latipes, medaka
- Order Callionymiformes
- *Callionymus lyra, common dragonet
- Order Carangiformes
- * Caranx ignobilis, Giant trevally
- * Caranx melampygus, Bluefin trevally
- * Pseudocaranx georgianus, New Zealand trevally
- Order Centrarchiformes
- * Oplegnathus fasciatus, barred knifejaw
- * Siniperca roulei
- Order Characiformes
- * Astyanax jordani, Mexican cavefish
- * Astyanax mexicanus, Mexican tetra
- *Colossoma macropomum, Tambaqui
- *Hasemania nana, Silvertip tetra
- *Hyphessobrycon heterorhabdus, Flag tetra
- *Petitella bleheri, Firehead tetra
- *Psalidodon paranae,
- Order Cichliformes
- * Oreochromis niloticus, Nile tilapia
- * Maylandia zebra, Lake Malawi cichlid
- Order Clupeiformes
- * Clupea harengus, Atlantic herring
- * Coilia nasus, Japanese grenadier anchovy
- * Sardina pilchardus, European pilchard
- Order Cypriniformes
- *Anabarilius grahami, Kanglang fish
- * Danio rerio, zebrafish
- *Leuciscus baicalensis, Siberian dace
- * Megalobrama amblycephala, Wuchang bream
- *Metzia formosae,
- *Opsarius caudiocellatus,
- * Oxygymnocypris stewartii,
- * Pseudobrama simoni
- * Rhodeus ocellatus, Rosy bitterling
- *Triplophysa bleekeri, Tibetan stone loach
- Order Cyprinodontiformes
- *Fundulus catenatus, Northern studfish
- *Fundulus olivaceus, Blackspotted topminnow
- *Fundulus nottii, Bayou topminnow
- *Fundulus xenicus, Diamond killifish
- *Gambusia affinis, western mosquitofish
- *Heterandria formosa, least killifish
- * Micropoecilia picta, swamp guppy
- * Xiphophorus maculatus, platyfish
- * Nothobranchius furzeri, turquoise killifish
- Order Esociformes
- * Esox lucius, northern pike
- Order Gadiformes
- * Gadus macrocephalus, Pacific cod
- * Gadus morhua, Atlantic cod
- Order Gasterosteiformes
- * Gasterosteus aculeatus, three-spined stickleback
- Order Gobiiformes
- * Oxyeleotris marmorata, marble goby
- * Periophthalmus modestus, shuttles hoppfish or shuttles mudskipper
- Order Gymnotiformes
- *Electrophorus electricus, electric eel
- Order Lampriformes
- * Lampris incognitus, Smalleye Pacific Opah
- Order Osmeriformes
- * Neosalanx tangkahkeii, Chinese icefish
- * Protosalanx hyalocranius, clearhead icefish
- Order Osteoglossiformes
- * Heterotis niloticus, African arowana
- * Paramormyrops kingsleyae, mormyrid electric fish
- * Scleropages formosus, Asian arowana
- Order Perciformes
- * Centropyge bicolor, bicolor angelfish
- *Chaetodon trifasciatus, melon butterflyfish
- * Channa argus, northern snakehead
- *Channa maculata, blotched snakehead
- *Chelmon rostratus, copperband butterflyfish
- *Chrysiptera cyanea, Sapphite damselfish
- *Dissostichus mawsoni, Antarctic toothfish
- *Eleginops maclovinus, Patagonian robalo
- *Epinephelus moara, kelp grouper
- *Larimichthys crocea, large yellow croaker
- *Lutjanus campechanus, Northern red snapper
- * Naso vlamingii, bignose unicornfish
- *Parachaenichthys charcoti, Antarctic dragonfish
- *Rachycentron canadum, Cobia
- *Seriola dumerili, Greater amberjack
- *Sillago sinica, chinese sillago
- *Siniperca knerii, Big-Eye Mandarin Fish
- *Sparus aurata, gilt-head bream
- *Holacanthus passer, King Angelfish
- *Oplegnathus fasciatus, Barred knifejaw
- Order Pleuronectiformes
- * Microstomus kitt, Lemon sole
- Order Salmoniformes
- * Salmo salar, Atlantic salmon
- * Oncorhynchus mykiss, rainbow trout
- * Oncorhynchus tshawytscha, Chinook salmon
- * Salvelinus namaycush, Lake Trout
- Order Scorpaeniformes
- * Sebastes schlegelii, Black rockfish
- Order Siluriformes
- * Clarias batrachus, walking catfish
- * Ictalurus punctatus, channel catfish
- *Pangasianodon hypophthalmus, Iridescent shark catfish
- *Silurus glanis, Wels catfish
- Order Spariformes
- * Datnioides pulcher, Siamese tigerfish
- * Datnioides undecimradiatus, Mekong tiger perch
- Order Syngnathiformes
- * Syngnathus scovelli, Gulf pipefish
- * Entelurus aequoreus, Snake pipefish
- Order Tetraodontiformes
- * Diodon holocanthus, Long-spine porcupinefish
- * Mola mola, ocean sunfish
- *Takifugu rubripes, a puffer fish
- *Tetraodon nigroviridis, a puffer fish
Lobe-Finned Fish (Excluding Tetrapods)
Coelacanths (Actinistia)
Order [Coelacanth]iformes
Lungfish (Dipnoi)
Order [Ceratodontiformes]
Amphibians
Frogs (Anura)
Taudactylus pleione, Kroombit tinker frog Leptobrachium leishanense, Leishan Moustache toad- Limnodynastes dumerilii dumerilii, Eastern banjo frog
- Nanorana parkeri, High Himalaya frog Oophaga pumilio, Strawberry poison-dart frog Platyplectrum ornatum, Ornate burrowing frog
- Pyxicephalus adspersus, African bullfrog American bullfrog|Rana catesbeiana, North American bullfrog Rana kukunoris, Plateau brown frog
- Rhinella marina, Cane toad Vibrissaphora ailaonica, Moustache toad Xenopus tropicalis, western clawed frog Mixophyes australis, australian southern stuttering frog Spea multiplicata, spadefoot toad Pelobates cultripes, Western spadefoot toad Dendrobates tinctorius, Dyeing poison frog Ranitomeya imitator, mimic poison frog Phyllobates terribilis, Dart-poison frog Staurois parvus, foot-flagging frog
Salamanders (Urodela)
- Clade Salamandroidea
- * Family Salamandridae
- ** Pleurodeles waltl, Iberian ribbed newt,
- ** Triturus cristatus, great crested newt
- * Family Ambystomatidae
- ** Ambystoma mexicanum, Axolotl
Caecillians
- Family Dermophiidae
- * Geotrypetes seraphini, Gaboon caecillian,
- Family Siphonopidae
- * Microcaecilia unicolor, a caecillian,
Birds
Ratites (Palaeognathae)
Order [Struthioniformes]
Order [Rheiformes] (Rheas)
† Order Dinornithiformes">Moa">Dinornithiformes (Moas)
Order Tinamiformes">Tinamou">Tinamiformes (Tinamous)
Order Apterygiformes">Kiwi (bird)">Apterygiformes (Kiwis)
Order [Casuariiformes]
Fowl (Galloanserae)
Order [Anseriformes] (Waterfowl)
Order [Galliformes] (Landfowl)
Neoaves
Mirandornithes
Order [Phoenicopteriformes] (Flamingos)
Order [Podicipediformes] (Grebes)
Columbaves
Order Columbiformes">Columbidae">Columbiformes
Order Mesitornithiformes">Mesite">Mesitornithiformes (Mesites)
Order Pterocliformes">Sandgrouse">Pterocliformes (Sandgrouse)
Order Musophagiformes">Turaco">Musophagiformes (Turacos)
Order Otidiformes">Bustard">Otidiformes (Bustards)
Order Cuculiformes">Cuckoo">Cuculiformes (Cuckoos)
Gruae
Order Opisthocomiformes">Opisthocomidae">Opisthocomiformes
Order [Gruiformes]
Order [Charadriiformes]
Strisores
Order [Caprimulgiformes] (Nightjars)
Order [Apodiformes]
Phaethoquornithes
Order Phaethontiformes| Family | Subfamily | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
| Phaethon lepturus | 2014 |
Order [Eurypygiformes]
Order [Gaviiformes] (Loons)
Order [Procellariiformes] (Petrels)
Order [Sphenisciformes] (Penguins)
- Genus Aptenodytes
- * Aptenodytes forsteri, Emperor penguin
- *Aptenodytes patagonicus, King penguin
- Genus Eudyptes
- *Eudyptes chrysocome, Western rockhopper penguin
- *Eudyptes chrysolophus chrysolophus, Macaroni penguin
- *Eudyptes chrysolophus schlegeli, Royal penguin
- *Eudyptes filholi, Eastern rockhopper penguin
- *Eudyptes moseleyi, Northern rockhopper penguin
- *Eudyptes pachyrhynchus, Fiordland penguin
- *Eudyptes robustus, Snares penguin
- *Eudyptes sclateri, Erect-crested penguin
- Genus Eudyptula
- *Eudyptula minor albosignata, White-flippered penguin
- *Eudyptula minor minor, Little blue penguin
- *Eudyptula novaehollandiae, Fairy penguin
- Genus Megadyptes
- *Megadyptes antipodes antipodes, Yellow-eyed penguin
- Pygoscelis
- *Pygoscelis adeliae, Adélie penguin
- *Pygoscelis antarctica, Chinstrap penguin
- *Pygoscelis papua, Gentoo penguin
- Genus Spheniscus
- *Spheniscus demersus, African penguin
- *Spheniscus humboldti, Humboldt penguin
- *Spheniscus magellanicus, Magellanic penguin
- *Spheniscus mendiculus, Galápagos penguin
Order Ciconiiformes">Stork">Ciconiiformes (Storks)
Order [Suliformes]
Order [Pelecaniformes]
Afroaves
Order Strigiformes">Owl">Strigiformes (Owls)
Order [Accipitriformes]
Add 87 hawk genomes found here:Order Coliiformes">Mousebird">Coliiformes (Mousebirds)
Order Leptosomiformes">Cuckoo-roller">Leptosomiformes
Order [Trogon]iformes (Trogons)
Order [Bucerotiformes]
Order [Coraciiformes]
Order [Piciformes]
Australaves
Order [Cariamiformes]
Order [Falconiformes] (Falcons)
Order Psittaciformes">Parrot">Psittaciformes (Parrots)
Order Passeriformes">Passerine">Passeriformes (Passerines)
Turtles
Crytodira (Hidden-Neck Turtles)
Trionychia (Softshell Turtles)
Testudinoidea
Chelonioidea (Sea Turtles)
Chelydroidea
Squamates
Gekkota (Gekkos)
- Clade Gekkomorpha
- * Family Eublepharidae
- ** Eublepharis macularius, Leopard gecko
- *Family Gekkonidae
- **Lepidodactylus listeri, Lister's gecko
- *Family Diplodactylidae
- **Correlophus ciliatus, crested gecko
Scinciformata
- Clade Cordylomorpha
- * Family Cordylidae
- ** Hemicordylus capensis, Cape cliff lizard,
- Cryptoblepharus egeriae, Christmas island blue-tailed skink
Laterata
- Clade Teiformata
- * Family Teiidae
- ** Salvator merianae, Argentine black and white tegu,
- Clade Lacertiformata
- * Family Lacertidae
- ** Zootoca vivipara, Viviparous lizard
Toxicofera
Anguimorpha
- Clade Paleoanguimorpha
- * Family Shinisauridae
- ** Shinisaurus crocodilurus, Chinese crocodile lizard,
- Clade Neoanguimorpha
- * Family Helodermatidae
- ** Heloderma charlesbogerti, Guatemalan beaded lizard,
- * Family Anguidae
- ** Dopasia gracilis, Burmese glass lizard,
Iguania
- Clade Acrodonta
- * Family Agamidae
- ** Pogona vitticeps, Central bearded dragon,
- Clade Pleurodonta
- * Family Dactyloidae
- ** Anolis carolinensis, Carolina anole,
- * Family Phrynosomatidae
- ** Phrynosoma platyrhinos, Dessert horned lizard,
- ** Phrynosoma cornutum, Texas horned lizard,
- ** Sceloporus undulatus, Eastern fence lizard
Serpentes (Snakes)
- Clade Scolecophidia
- * Family Typhlopidae
- ** Anilios bituberculatus, Prong-snouted blind snake
- ** Indotyphlops braminus, Brahminy blindsnake,
- Clade Booidea
- * Family Pythonidae
- ** Morelia viridis, Green Tree Python
- ** Python bivittatus, Burmese python
- ** Python regius, Ball python
- ** Simalia boeleni, Boelen's Python
- * Family Boidae
- ** Boa constrictor, Boa constrictor
- ** Charina bottae, Rubber boa,
- Clade Caenophidia
- * Family Viperidae
- ** Azemiops feae, Fea's viper
- ** Bothrops jararaca, Jararaca lancehead,
- ** Crotalus adamanteus, Eastern diamondback rattlesnake
- ** Crotalus mitchellii pyrrhus, southwestern speckled rattlesnake
- **Crotalus oreganus helleri, southern Pacific rattlesnake
- **Crotalus tigris, Tiger rattlesnake
- **Crotalus viridis, Great Plains rattlesnake
- ** Daboia siamensis, Eastern Russell's viper
- ** Deinagkistrodon acutus, Five-pacer viper
- ** Protobothrops flavoviridis, Okinawa Habu
- ** Protobothrops mucrosquamatus, Taiwanese Habu
- ** Trimeresurus albolabris, White-lipped tree pit viper
- ** Cerastes gasperetti, Arabian horned viper
- *Family Homalopsidae
- **Myanophis thanlyinesis,,
- *Family Colubridae
- **Ahaetulla prasina, Asian vine snake
- ** Arizona elegans occidentalis, California glossy snake
- **Chrysopelea ornata, Ornate Flying Snake
- **Diadophis punctatus, ring-necked snake
- ** Dolichophis caspius, Caspian whipsnake
- **Elaphe carinata, King ratsnake
- **Pantherophis guttatus, corn snake
- ** Pantherophis obsoletus, Leucistic Texas Rat Snake
- **Ptyas mucosa, Oriental rat snake
- **Thamnophis sirtalis, Common garter snake
- **Thermophis baileyi, Tibetan hot-spring snake
- *Family Elapidae
- **Bungarus multicinctus, Many-banded krait
- **Emydocephalus ijimae, Ijima's turtle-headed sea snake,
- **Hydrophis curtus, Shaw's Sea Snake
- **Hydrophis cyanocinctus, blue-banded sea snakes
- ** Hydrophis melanocephalus, slender-necked sea snake,
- ** Laticauda colubrina, yellow-lipped sea krait,
- ** Laticauda laticaudata, blue-lipped sea krait,
- ** Naja atra, Chinese cobra
- ** Naja naja, Indian cobra
- ** Notechis scutatus, mainland tiger snake
- ** Ophiophagus hannah, king cobra
- ** Pseudonaja textilis, Eastern brown snake
Mammals
Marsupials
- Order Didelphimorphia
- * Family Didelphidae
- ** Monodelphis domestica, gray short-tailed opossum
- Order Dasyuromorphia
- * Family Dasyuridae
- ** Antechinus stuartii, brown antechinus
- **Sarcophilus harrisii, Tasmanian devil
- **Sminthopsis crassicaudata, fat-tailed dunnart
- **Dasyurus hallucatus, northern quoll
- * Family Myrmecobiidae
- ** Myrmecobius fasciatus, numbat
- * † Family Thylacinidae
- ** † Thylacinus cynocephalus, thylacine
- Order Peramelemorphia
- * Family Peramelidae
- ** Perameles gunnii, eastern barred bandicoot
- * Family Thylacomyidae
- ** Macrotis lagotis, greater bilby
- Order Notoryctemorphia, Family Notoryctidae
- * Notoryctes typhlops, southern marsupial mole
- Order Diprotodontia
- * Family Macropodidae
- ** Macropus eugenii, tammar wallaby
- ** Petrogale penicillata, brush-tailed rock-wallaby
- * Family Potoroidae
- ** Bettongia gaimardi, eastern bettong
- ** Bettongia penicillata ogilbyi, woylie
- * Family Petauridae
- ** Gymnobelideus leadbeateri, Leadbeater's possum
- * Family Burramyidae
- ** Burramys parvus, mountain pygmy possum
- * Family Vombatidae
- ** Vombatus ursinus, common wombat
- * Family Phascolarctidae
- ** Phascolarctos cinereus, koala
Placentals
Afrotheria
Order Hyracoidea">Hyrax">Hyracoidea
- Family Procaviidae
- * Procavia capensis, Rock hyrax,
| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Order [Proboscidea]
- Family Elephantidae
- * Elephas maximus, Asian elephant,
- * † Mammuthus primigenius, Wooly mammoth,
- * Loxodonta africana, African bush elephant,
- * Loxodonta cyclotis, African forest elephant,
| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Order [Sirenia] (Sea Cows)
- Family Trichechidae
- * Trichechus manatus, West Indian manatee,
- Family Dugongidae
- *Dugong dugon, Dugong,
| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Euarchontoglires
- Order Lagomorpha
- * Family Leporidae
- ** Oryctolagus cuniculus, European rabbit
- Order Primates
- * Family Callitrichidae
- ** Callithrix jacchus, Common marmoset
- * Family Cercopithecidae
- ** Macaca mulatta, rhesus macaque
- ** Macaca fascicularis, Cynomolgus or crab-eating macaque
- **Papio anubis, olive baboon
- **Papio cynocephalus, yellow baboon
- ** Rhinopithecus roxellana, golden snub-nosed monkey
- * Family Galagidae
- ** Otolemur garnettii, small-eared galago, or bushbaby
- * Family Hominidae
- ** Subfamily Ponginae
- *** Pongo pygmaeus/''Pongo abelii, orangutan
- ** Subfamily Homininae
- *** Gorilla gorilla, western gorilla
- *** Homo sapiens, modern human
- *** † Homo neanderthalensis, Neanderthal
- *** Pan troglodytes, chimpanzee
- *** Pan paniscus, bonobo
- Order Rodentia
- * Family Caviidae
- ** Hydrochoerus hydrochaeris, capybara
- * Family Cricetidae
- ** Microtus montanus, Montane vole
- ** Microtus richardsoni, North American Water Vole
- ** Peromyscus leucopus, white-footed mouse
- * Family Heteromyidae
- ** Perognathus longimembris pacificus, Pacific Pocket Mouse
- * Family Muridae
- ** Mastomys coucha, Southern multimammate mouse
- ** Mus musculus Strain: C57BL/6J, House mouse
- ** Rattus norvegicus'', Brown rat
Laurasiatheria
- Order Artiodactyla
- * Family Antilocapridae
- ** Antilocapra americana, pronghorn
- *Family Balaenidae
- **Balaena mysticetus, bowhead whale
- **Eubalaena glacialis, North Atlantic right whale
- *Family Balaenopteridae
- ** Balaenoptera acutorostrata, common minke whale
- **Balaenoptera borealis, sei whale
- **Balaenoptera musculus, blue whale
- ** Balaenoptera physalus, fin whale
- **Megaptera novaeangliae, humpback whale
- * Family Bovidae
- ** Ammotragus lervia, Barbary sheep
- ** Antidorcas marsupialis, Springbox
- ** Bison bonasus, European bison
- ** Bos grunniens, yak 2012
- ** Bos primigenius indicus, zebu or Brahman cattle
- ** Bos primigenius taurus, cow 2009
- ** Bubalus bubalis, river buffalo
- ** Budorcas taxicolor, Takin
- ** Capra ibex, Goats
- ** Cephalophus harveyi, Harvey's duiker
- ** Connochaetes taurinus, blue wildebeest
- ** Damaliscus lunatus, common tsessebe
- ** Gazella thomsoni, Thomson's gazelle
- ** Hippotragus niger, Sable Antelope
- ** Kobus ellipsiprymnus, Waterbuck
- ** Litocranius walleri, Gerenuk
- ** Oreotragus oreotragus, Klipspringer
- ** Oryx gazella, Gemsbok
- ** Ourebia ourebi, Oribi
- ** Ovis ammon, Argali
- ** Ovis ammon polii, marco polo sheep
- ** Nanger granti, Grant's gazelle
- ** Neotragus moschatus, Suni
- ** Neotragus pygmaeus, Royal antelope
- ** Philantomba maxwellii, Maxwell's duiker
- ** Procapra przewalskii, Przewalski's gazelle
- ** Pseudois nayaur, Bharal
- ** Pseudoryx nghetinhensis, Saola
- ** Raphicerus campestris, Steenbox
- ** Redunca redunca, Bohor reedbuck
- ** Syncerus caffer, African buffalo
- ** Sylvicapra grimmia, common duiker
- ** Tragelaphus, Spiral-horned bovine
- ** Tragelaphus buxtoni, Mountain nyala
- ** Tragelaphus strepsiceros, Greater kudu
- ** Tragelaphus imberbis, Lesser kudu
- ** Tragelaphus spekii, Sitatunga
- ** Tragelaphus scriptus, Bushbuck
- ** Taurotragus oryx, Common eland
- *Family Camelidae
- ** Camelus ferus, Wild Bactrian camel
- * Family Cervidae
- ** Cervus albirostris, Tharold's deer
- ** Elaphurus davidianus, Père David's deer
- ** Muntiacus crinifrons, hairy-fronted muntjac
- ** Muntiacus muntjak, Indian muntjac
- ** Muntiacus reevesi, Reeves's muntjac
- **Odocoileus hemionus, mule deer
- ** Rangifer tarandus, Reindeer
- ** Rusa alfredi, Visayan spotted deer
- *Family Delphinidae
- ** Tursiops truncatus, bottlenosed dolphin
- ** Neophocaena phocaenoides, finless porpoise
- ** Orcinus orca, killer whale
- ** Sousa chinensis, Indo-Pacific humpback dolphin
- *Family Eschrichtiidae
- **Eschrichtius robustus, gray whale
- * Family Giraffidae
- ** Giraffa camelopardalis, Giraffe
- ** Giraffa camelopardalis tippelskirchi, Masai giraffe
- ** Okapia johnstoni, Okapi
- *Family Monodontidae
- ** Delphinapterus, beluga whale
- * Family Moschidae
- ** Moschus berezovskii, forest musk deer
- ** Moschus chrysogaster, Alpine musk deer
- *Family Phocoenidae
- **Neophocaena asiaeorientalis sunameri, East Asian finless porpoise
- **Neophocaena asiaorientalis asiaorientalis, Yangtze finless porpoise
- *Family Physeteridae
- ** Physeter macrocephalus, sperm whale
- *Family Suidae
- ** Sus scrofa, pig
- * Family Tragulidae
- ** Tragulus javanicus, Java mouse-deer
- Order Carnivora
- * Family Felidae
- ** Acinonyx jubatus, cheetah
- ** Felis catus, cat
- ** Panthera leo, lion
- ** Panthera pardus, Amur leopard
- ** Panthera tigris tigris, Siberian tiger
- ** Panthera tigris tigris, Bengal tiger
- ** Panthera uncia, snow leopard
- ** Prionailurus bengalensis, leopard cat
- * Family Canidae
- ** Canis familiaris, dog
- ** Canis lupus lupus, wolf.
- ** Lycaon pictus, african wild dog
- * Family Ursidae
- ** Ailuropoda melanoleuca, giant panda
- ** Ursus arctos ssp. horribilis, Grizzly bear
- ** Ursus americanus, American black bear
- ** Ursus maritimus, Polar bear
- * Family Odobenidae
- ** Odobenus rosmarus, walrus
- *Family Phocidae
- **Pusa sibirica, Baikal seal
- **Pusa caspica, Caspian seal
- **Phoca vitulina, Harbor seal
- **Pusa hispida, Ringed seal
- * Family Mustelidae
- ** Enhydra lutris ''kenyoni, sea otter
- ** Mustela erminea, stoat
- ** Mustela furo, ferret
- ** Pteronura brasiliensis, giant otter
- Order Chiroptera
- * Family Megadermatidae
- ** Megaderma lyra, greater false vampire bat
- * Family Mormoopidae
- ** Pteronotus parnellii, Parnell's mustached bat
- * Family Pteropodidae
- ** Pteropus vampyrus, fruit bat
- ** Eidolon helvum, Old World fruit bat
- * Family Rhinolophidae
- ** Rhinolophus ferrumequinum, greater horseshoe bat
- * Family Vespertilionidae
- ** Myotis lucifugus, little brown bat
- ** Myotis mystacinus, whiskered bat
- * Family Phyllostomidae
- **Leptonycteris yerbabuenae, long nosed bat
- ** Leptonycteris nivalis, greater long nosed bat
- ** Musonycteris harrisoni, banana bat
- ** Artibeus jamaicensis, Jamaican fruit bat
- ** Macrotus waterhousii, Waterhouse's leaf-nosed bat
- Order Eulipotyphla, Family Solenodontidae
- * Solenodon parodoxus, Hispaniolan solenodon
- Order Perissodactyla
- *Family Equidae
- **Equus caballus'', horse
Arthropods
Insects
- Order Blattodea
- * Blattella germanica, German cockroach
- * Periplaneta americana, American cockroach
- * Zootermopsis nevadensis, a dampwood termite
- * Macrotermes natalensis, a higher termite
- * Aquatica lateralis, Japanese aquatic firefly "Heike-botaru"
- * Photinus pyralis, Big Dipper firefly
- * Protaetia brevitarsis, White-spotted flower chafer
- * Tribolium castaneum Strain:GA-2, beetle
- * Allomyrina dichotoma, Japanese rhinoceros beetle
- * Pachyrhynchus sulphureomaculatus, Easter Egg Weevil
- Order Collembola
- * Family Isotomidae
- ** Desoria tigrina,
- * Family Sminthurididae
- ** Sminthurides aquaticus,
- Order Diptera
- * Family Calliphoridae
- ** Aldrichina grahami, Forensic blowfly
- * Family Chironomidae
- ** Dasypogon diadema, Hunting Robber fly
- ** Parochlus steinend, Antarctic winged midge
- ** Proctacanthus coquilletti, Assassin fly
- * Family Culicidae
- ** Aedes aegypti Strain:LVPib12, mosquito
- ** Aedes albopictus
- ** Anopheles darlingi
- ** Anopheles gambiae Strain: PEST, mosquito
- ** Anopheles gambiae Strain: M, mosquito
- ** Anopheles gambiae Strain: S, mosquito
- ** Anopheles sinensis, mosquito,
- ** Anopheles stephensii
- ** Anopheles arabiensis
- ** Anopheles quadriannulatus
- ** Anopheles merus
- ** Anopheles melas
- ** Anopheles christyi
- ** Anopheles epiroticus
- ** Anopheles maculatus
- ** Anopheles culicifacies
- ** Anopheles minimus
- ** Anopheles funestus
- ** Anopheles dirus
- ** Anopheles farauti
- ** Anopheles atroparvus
- ** Anopheles sinensis
- ** Anopheles albimanus
- ** Culex quinquefasciatus, mosquito
- * Family Drosophilidae
- ** Drosophila albomicans, fruit fly
- ** Drosophila ananassae, fruit fly
- ** Drosophila biarmipes, fruit fly
- ** Drosophila bipectinata, fruit fly
- ** Drosophila erecta, fruit fly
- ** Drosophila elegans, fruit fly
- ** Drosophila eugracilis, fruit fly
- ** Drosophila ficusphila, fruit fly
- ** Drosophila grimshawi, fruit fly
- ** Drosophila kikkawai, fruit fly
- ** Drosophila melanogaster, fruit fly
- ** Drosophila mojavensis, fruit fly
- ** Drosophila neotestacea, fruit fly
- ** Drosophila persimilis, fruit fly
- ** Drosophila pseudoobscura, fruit fly
- ** Drosophila rhopaloa, fruit fly
- ** Drosophila santomea, fruit fly
- ** Drosophila sechellia, fruit fly
- ** Drosophila simulans, fruit fly
- ** Drosophila takahashi, fruit fly
- ** Drosophila virilis, fruit fly
- ** Drosophila willistoni, fruit fly
- ** Drosophila yakuba, fruit fly
- * Family Phoridae
- ** Megaselia abdita, scuttle fly
- * Family Psychodidae
- ** Clogmia albipunctata, moth midge
- * Family Sarcophagidae
- ** Sarcophaga Bullata, Flesh fly
- * Family Syrphidae
- ** Episyrphus balteatus, hoverfly
- Order Hemiptera
- * Acyrthosiphon pisum, aphid
- * Ericerus pela, Chinese wax scale insect
- * Laodelphax striatellus, small brown planthopper
- * Lycorma delicatula, spotted lanternfly
- * Rhodnius prolixus, kissing-bug
- * Rhopalosiphum maidis, Corn leaf aphid
- * Sitobion miscanthi, Indian grain aphid
- * Triatoma rubrofasciata, assassin bug
- Order Hymenoptera
- * Acromyrmex echinatior colony Ae372, ant
- * Apis mellifera, bee,
- * Atta cephalotes, ant
- * Camponotus floridanus, ant
- * Cerapachys biroi, ant
- * Euglossa dilemma, Green orchid bee
- * Harpegnathos saltator, ant
- * Lasius niger, ant
- * Linepithema humile, ant
- * Nasonia giraulti, wasp
- * Nasonia longicornis, wasp
- * Nasonia vitripennis, wasp
- * Nomia Melanderi, Alkali bee
- * Pogonomyrmex barbatus, ant
- * Solenopsis invicta, ant
- Order Lepidoptera
- * Abrostola tripartita Hufnagel, Spectacle
- * Achalarus lyciades, Hoary Edge Skipper
- * Ahamus jianchuanensis, Jianchuan ghost moth
- * Antharaea yamamai, Japanese oak silk moth
- *Arctia plantaginis, Wood tiger moth
- * Bicyclus anynana, squinting bush brown
- * Bombyx mori Strain:p50T, moth
- * Calycopis cecrops, Red-Banded Groundstreak
- * Calycopis isobeon, Dusky-Blue Groundstreak
- * Coenonympha arcania, Pearly Heath
- * Cydia pomonella, codling moth
- * Danaus plexippus, monarch butterfly)
- * Heliconius melpomene, butterfly
- * Keiferia lycopersicella, Tomato pinworm
- * Melitaea cinxia, Glanville fritillary butterfly
- * Megathymus ursus violae, bear giant skipper butterfly
- * Morpho helenor, Common blue morpho
- * Morpho achilles, Blue-banded morpho
- * Morpho deidamia
- * Papilio bianor, Chinese peacock butterfly
- * Phthorimaea absoluta, Tomato leafminer
- * Pieris rapae, small cabbage white butterfly
- * Plodia interpunctella, Indianmeal moth
- * Plutella xylostella, moth
- * Scrobipalpa atriplicella, Goosefoot groundling moth
- * Spodoptera frugiperda, Fall armyworm
- * Thitarodes armoricanus, Himalaya ghost moth
- * Thitarodes xiaojinensis, Xiaojin ghost moth
- * Troides aeacus, Golden birdwing
- * Eudocima phalonia, fruit-piercing moth
- Order Orthoptera
- * Locusta migratoria, migratory locust
- * Schistocerca gregaria, desert locust
- * Gryllus bimaculatus, two-spotted cricket
- Order Phthiraptera
- * Pediculus humanus, louse
- * Menopon gallinae, Poutlry shaft louse
- Psocoptera
- * Liposcelis brunnea, booklouse
- Order Raphidioptera
- * Venustoraphidia nigricollis, black-necked snakefly
- Order Trichoptera
- * Eubasilissa regina, purple caddisfly
- * Stenopsyche tienmushanensisi, Caddisfly
- Order Mantodea
- *Tenodera sinensis, chinese praying mantis
Crustaceans
Acartia tonsa dana, cosmopolitan calanoid copepod Cherax quadricarinatus, Red claw crayfish Daphnia pulex, water flea Eulimnadia texana, Clam Shrimp- Macrobrachium nipponense, oriental river prawn Neocaridina denticulata, shrimp Parhyale hawaiensis, amphipod Pollicipes pollicipes, Gooseneck barnacle Portunus trituberculatus, swimming crab Procambarus virginalis, marbled crayfish Sphaeroma terebrans, a wood-boring isopod Tigriopus kingsejongensis, antarctic-endemic copepod
Chelicerates
Order Xiphosura:Limulus polyphemus, Atlantic horseshoe crab Carcinoscorpius rotundicauda, mangrove horseshoe crab Tachypleus tridentatus, tri-spine horseshoe crabOrder Ixodida:Ixodes scapularis, deer tick
Order Mesostigmata:Tropilaelaps mercedesae, honeybee mite
Order Trombidiformes:Tetranychus urticae, spider mite
Order Scorpiones:Mesobuthus martensii, Chinese scorpion
Order Araneae:Acanthoscurria geniculata, Brazilian whiteknee tarantula
- Argiope bruennichi, European wasp spider Dysdera silvatica, Canary Island nocturnal endemic woodlouse spider Latrodectus elegans, Black widow spider Nephila clavipes, Parasteatoda tepidariorum, Stegodyphus mimosarum, African social velvet spider
- Uloborus diversus, Cribellate orb-weaving spider,
Myriapods
Strigamia maritima, centipedeTardigrades
Hypsibius dujardini, water bear| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Nematodes
- Ancylostoma ceylanicum, zoonotic hookworm infecting both humans and other mammals Aplectana chamaeleonis, amphibian parasite Ascaris suum, pig-infecting giant roundworm, closely related to human-infecting giant roundworm Ascaris lumbricoides Brugia malayi, human-infecting filarial parasite Bursaphelenchus xylophilus, infects pine trees Caenorhabditis angaria Caenorhabditis brenneri, a gonochoristic species more closely related to C. briggsae than C. elegansCaenorhabditis briggsae Caenorhabditis elegans, model organism Caenorhabditis remanei, a gonochoristic species more closely related to C. briggsae than C. elegansDirofilaria immitis, dog-infecting filarial parasite Globodera pallida, plant pathogen Haemonchus contortus, blood-feeding parasite infecting sheep and goats Heterodera glycines, soybean cyst nematode Heterorhabditis bacteriophora, Loa loa, human-infecting filarial parasite Meloidogyne hapla, northern root-knot nematode Meloidogyne incognita, southern root-knot nematode Necator americanus, human-infecting hookworm Onchocerca volvulus, human-infecting filarial parasitePristionchus pacificus, model invertebrate Romanomermis culicivorax, entomopathogenic nematode that invades larvae of various mosquito species Trichuris suis, pig-infecting whipworm Trichuris muris, mouse-infecting whipworm Trichuris trichiura, human-infecting whipworm Wuchereria bancrofti, human-infecting filarial parasite
| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Loricifera
Molluscs
Cephalopods
Architeuthis dux, giant squid Euprymna scolopes, Hawaiian bobtail squid Hapalochlaena maculosa, Southern blue-ringed octopus Octopus bimaculoides, California two-spot octopus Octopus minor, common long-arm octopus Octopus vulgaris, common octopus| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Bivalves
Argopecten purpuratus, peruvian scallop Bathymodiolus platifrons, seep mussel Chlamys farreri, Zhikong scallop Crassostrea angulata, Portuguese oyster Crassostrea gigas, Pacific oyster Dreissena rostriformis, Quagga mussel Limnoperna fortunei, invasive golden mussel Margaritifera margaritifera, European freshwater pearl mussel Modiolus philippinarum, shallow water mussel Mytilus galloprovincialis, Mediterranean mussel Panopea generosa, Pacific geoduck Patinopecten yessoensis, Yesso scallop Pecten maximus, Great scallop Pinctada fucata, Pearl oyster Ruditapes philippinarum, Manila clam Saccostrea glomerata, Sydney rock oyster Scapharca broughtonii, Blood clam Tridacna crocea, Giant clam Venustaconcha ellipsiformis, freshwater mussel| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Gastropods
Achatina fulica, giant African snail Biomphalaria glabrata, a medically important air-breathing freshwater snail in the family Planorbidae Biomphalaria straminea, Ramshorn snail Candidula unifasciata, Land snail Conus ventricosus, Mediterranean cone snail Elysia chlorotica, a solar-powered sea slug Haliotis discus hannai, pacific abalone Kalloconus canariensis, Canary Island cone shell- Kelletia kelletii, Kellet's whelk Lottia gigantea, owl limpet Plakobranchus ocellatus, Kleptoplastic sea slug Pomacea canaliculata, golden apple snail Littorina brevicula, periwinkle snail Littoraria sinensis
| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Platyhelminthes
Clonorchis sinensis, liver fluke Echinococcus granulosus, tapeworm Echinococcus multilocularis, tapeworm Hymenolepis microstoma, tapeworm Schistosoma haematobium, schistosome Schistosoma japonicum, schistosome Schistosoma mansoni, schistosome Schmidtea mediterranea, planarian Taenia solium, tapeworm| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Annelids
Capitella teleta, polychaete Helobdella robusta, leech Eisenia fetida, earthworm Paraescarpia echinospica, deep-sea tubeworm Hirudinaria manillensis, Asian Buffalo leech Hirudo nipponia, Japanese blood-sucking leech Whitmania pigra, Asian freshwater leech| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Bryozoa
Bugula neritina, bryozoan| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |
Brachiopoda
Lingula anatina, brachiopod| Family | Species | Assembly Name | Genome Size | Number of Predicted Genes | Reference | Assembly status |