Fractalkine is found commonly throughout the brain, particularly in neural cells, and its receptor is known to be present on microglial cells. It has also been found to be essential for microglial cell migration. CX3CL1 is also up-regulated in the hippocampus during a brief temporal window following spatial learning, the purpose of which may be to regulate glutamate-mediated neurotransmission tone. This indicates a possible role for the chemokine in the protective plasticity process of synaptic scaling.
Structure
Fractalkine is a large cytokineprotein of 373amino acids that containsmultiple domains and is the only known member of the CX3C chemokinefamily. It is also commonly known under the names fractalkine and neurotactin. The polypeptide structure of CX3CL1 differs from the typical structure of other chemokines. For example, the spacing of the characteristic N-terminalcysteines differs; there are three amino acids separating the initial pair of cysteines in CX3CL1, with none in CC chemokines and only one intervening amino acid in CXC chemokines. CX3CL1 is produced as a long protein with an extended mucin-like stalk and a chemokine domainon top. The mucin-like stalk permits it to bind to the surface of certain cells. However a soluble version of this chemokine has also been observed.