Alignment of protein sequences by their profiles
Alignment of protein sequences by their profiles is a scholarly work by Marc A. Martí‐Renom and Andrej Šali, published in 2004 in ''Protein Science''. The main subjects of the publication include protein structure prediction, multiple sequence alignment, MODELLER, biological sequence, computer science, computational biology, Smith–Waterman algorithm, benchmark, hidden Markov model, RNA sequencing, sequence alignment, Pairwise comparison, Alignment-free sequence analysis, and structural alignment. The authors optimize and benchmark such an approach that relies on aligning two multiple sequence alignments, each one including one of the two protein sequences.