Using Structure to Explore the Sequence Alignment Space of Remote Homologs
Using Structure to Explore the Sequence Alignment Space of Remote Homologs is a scholarly work by Barry Honig, published in 2011 in ''PLOS Computational Biology''. The main subjects of the publication include protein structure prediction, dynamic programming, Loop modeling, computer science, homology modeling, sequence alignment, limiter, Smith–Waterman algorithm, RNA sequencing, algorithm, set, Sequence logo, artificial intelligence, computational biology, glycosylation, Alignment-free sequence analysis, homology, multiple sequence alignment, protein structure, biological sequence, structural homology, and structural alignment. The authors present here a new suboptimal alignment method that relies heavily on the structure of the template.