Nucleoside
Nucleosides are glycosylamines that can be thought of as nucleotides without a phosphate group. A nucleoside consists simply of a nucleobase and a five-carbon sugar whereas a nucleotide is composed of a nucleobase, a five-carbon sugar, and one or more phosphate groups. In a nucleoside, the anomeric carbon is linked through a glycosidic bond to the N9 of a purine or the N1 of a pyrimidine. Nucleotides are the molecular building blocks of DNA and RNA.
List of nucleosides and corresponding nucleobases
This list does not include modified nucleobases and the corresponding nucleosidesEach chemical has a short symbol, useful when the chemical family is clear from the context, and a longer symbol, if further disambiguation is needed. For example, long nucleobase sequences in genomes are usually described by CATG symbols, not Cyt-Ade-Thy-Gua.
| Nitrogenous base | Ribonucleoside | Deoxyribonucleoside |
adenine symbol A or Ade | adenosine symbol A or Ado | deoxyadenosine symbol dA or dAdo |
guanine symbol G or Gua | guanosine symbol G or Guo | deoxyguanosine symbol dG or dGuo |
thymine symbol T or Thy | 5-methyluridine symbol m⁵U | thymidine symbol dT or dThd |
uracil symbol U or Ura | uridine symbol U or Urd | deoxyuridine symbol dU or dUrd |
cytosine symbol C or Cyt | cytidine symbol C or Cyd | deoxycytidine symbol dC or dCyd |
Use in medicine and technology
In medicine several nucleoside analogues are used as antiviral or anticancer agents. The viral polymerase incorporates these compounds with non-canonical bases. These compounds are activated in the cells by being converted into nucleotides. They are administered as nucleosides since charged nucleotides cannot easily cross cell membranes.In molecular biology, several analogues of the sugar backbone exist. Due to the low stability of RNA, which is prone to hydrolysis, several more stable alternative nucleoside/nucleotide analogues that correctly bind to RNA are used. This is achieved by using a different backbone sugar. These analogues include locked nucleic acids, morpholinos and peptide nucleic acids.
In sequencing, dideoxynucleotides are used. These nucleotides possess the non-canonical sugar dideoxyribose, which lacks 3' hydroxyl group. DNA polymerases cannot distinguish between these and regular deoxyribonucleotides, but when incorporated a dideoxynucleotide cannot bond with the next base and the chain is terminated.