Neolithodes nipponensis has a rounded pentagonal carapace whose margins are covered in several dozen sharp spines. It has been measured with a carapacelength as large as. With a legspan of approximately, its walkinglegs are densely covered with sharp prickles. Its chelipeds are similarly covered in prickles, but these are mixed in with longer spines angled substantiallyaway the from perpendicular. It has a very shortrostrum of approximately the length of its carapace. Its underside has seven abdominal segments which are well-defined and covered with prickles.