is a discipline that often uses the technique of annotation to describe or add additional historical context to texts and physical documents.
Students often highlight passages in books in order to refer back to key phrases easily, or add marginalia to aid studying. Annotated bibliographies add commentary on the relevance or quality of each source, in addition to the usual bibliographic information that merely identifies the source.
Mathematical expressions can be annotated with their natural language meaning. This is essential for disambiguation, since symbols may have different meanings. The annotation process can be facilitated and accelerated through recommendation, e.g., using the "AnnoMathTeX" system that is hosted by Wikimedia.
Learning and instruction
From a cognitive perspective annotation has an important role in learning and instruction. As part of guided noticing it involves highlighting, naming or labelling and commenting aspects of visual representations to help focus learners' attention on specific visual aspects. In other words, it means the assignment of typological representations, to topological representations. This is especially important when experts, such as medical doctors, interpret visualizations in detail and explain their interpretations to others, for example by means of digital technology. Here, annotation can be a way to establish common ground between interactants with different levels of knowledge. The value of annotation has been empirically confirmed, for example, in a study which shows that in computer-based teleconsultations the integration of image annotation and speech leads to significantly improved knowledge exchange compared with the use of images and speech without annotation.
Annotations were removed on January 15, 2019 from YouTube after around a decade of service. They had allowed users to provide information that popped up during videos, but YouTube indicated they did not work well on small mobile screens, and were being abused.
Software and engineering
s like XML and HTML annotate text in a way that is syntactically distinguishable from that text. They can be used to add information about the desired visual presentation, or machine-readable semantic information, as in the semantic web.
A special case is the Java programming language, where annotations can be used as a special form of syntactic metadata in the source code. Classes, methods, variables, parameters and packages may be annotated. The annotations can be embedded in class files generated by the compiler and may be retained by the Java virtual machine and thus influence the run-time behaviour of an application. It is possible to create meta-annotations out of the existing ones in Java.
Since the 1980s, molecular biology and bioinformatics have created the need for DNA annotation. DNA annotation or genome annotation is the process of identifying the locations of genes and all of the coding regions in a genome and determining what those genes do. An annotation is a note added by way of explanation or commentary. Once a genome is sequenced, it needs to be annotated to make sense of it.
In the digital imaging community the term annotation is commonly used for visible metadata superimposed on an image without changing the underlying master image, such as sticky notes, virtual laser pointers, circles, arrows, and black-outs. In the medical imaging community, an annotation is often referred to as a region of interest and is encoded in DICOM format.
One purpose of annotation is to transform the data into a form suitable for computer-aided analysis. Prior to annotation, an annotation scheme is defined that consists of tags. During tagging, transcriptionists manually add tags into transcripts where required linguistical features are identified in an annotation editor. The annotation scheme ensures that the tags are added consistently across the data set and allows for verification of previously tagged data. The Linguistic Annotation Wiki also describes formats for creating and managing linguistic annotations.