List of sequenced fungi genomes
This list of sequenced fungi genomes contains all the fungal species known to have publicly available complete genome sequences that have been assembled, annotated and published; draft genomes are not included, nor are organelle only sequences. For all kingdoms, see lists of sequenced genomes.
[Ascomycota]
[Dothideomycetes]
Aureobasidium pullulans, A. melanogenum, A. subglaciale and A. ''namibiae, polyextremotolerant Hortaea werneckii, extremely halotolerant Leptosphaeria maculans, plant pathogen Macrophomina phaseolina, plant pathogen Mycosphaerella fijiensis, plant pathogen Mycosphaerella graminicola IPO323, wheat pathogen Phaeosphaeria nodorum SN15, wheat pathogen Pyrenophora tritici-repentis'' Pt-1C-BFP, wheat pathogen[Eurotiomycetes]
Ajellomyces capsulata several strains, Darling's disease Ajellomyces dermatitidis several strains Arthroderma benhamiae CBS 112371, skin infection Arthroderma gypseum CBS 118893, athlete's foot Arthroderma otae CBS 113480, athlete's foot Aspergillus aculeatus ATCC16872, industrial use Aspergillus carbonarius ITEM 5010, food pathogen Aspergillus clavatus Strain:NRRL1 Aspergillus fumigatus Strain:A1163, human pathogen Aspergillus fumigatus Strain:Af293, human pathogen Aspergillus kawachii IFO 4308, food industry Aspergillus nidulans Strain:FGSC A4, model organism Aspergillus niger Strain:ATCC 1015 Aspergillus niger Strain:CBS 513.88, industrial use Aspergillus oryzae Strain:RIB40, industrial use Aspergillus terreus NIH 2624, statin producer and pathogen Coccidioides immitis, human pathogen, Valley fever Coccidioides posadasii C735 delta SOWgp, human pathogen, Valley fever Neosartorya fischeri Strain:NRRL181 Paracoccidioides brasiliensis, several strains, human pathogen Penicillium digitatum Strain PHI26 Penicillium digitatum Strain Pd1[Leotiomycetes]
Blumeria graminis ffsp hordei Strain:DH14, plant pathogen Botrytis cinerea Strain:B05.10 and T4, plant pathogen Glarea lozoyensis Sclerotinia sclerotiorum Strain:1980 Ascocoryne sarcoides Strain: NRRL50072 Podosphaera macularis Strain: HPM-609, plant pathogen[Pezizomycetes]
- Cladobotryum protrusum
- Tuber melanosporum Mel28, Périgord black truffle
[Saccharomycetes]
Ashbya gossypii Strain:ATCC 10895, plant pathogen Candida albicans Strain:SC5314, human pathogen Candida albicans Strain:WO-1, human pathogen Candida dubliniensis CD36, human pathogen Candida glabrata Strain:CBS138, human pathogen Candida guilliermondii, human pathogen Candida lusitaniae, human pathogen Candida parapsilosis, human pathogen Candida orthopsilosis, human pathogen Candida tropicalis, human pathogen Debaryomyces hansenii Strain:CBS767, industrial use Debaryomyces hansenii Strain:MTCC 234, salt-tolerant Dekkera bruxellensis Strain:CBS2499, wine yeast Hansenula polymorpha NCYC 495 leu1.1, industrial use Kluyveromyces aestuarii ATCC 18862 Kluyveromyces lactis Strain:CLIB210, industrial use Kluyveromyces wickerhamii UCD 54-210 Lachancea kluyveri NRRL Y-12651, plant pathogen Lodderomyces elongisporus, human pathogen Naumovozyma castellii Strain:AS 2.2404, CBS 4309 Naumovozyma dairenensis Strain:CBS 421 Saccharomyces bayanus Saccharomyces arboricolus Saccharomyces cerevisiae Strain:JAY291, industrial/model Saccharomyces cerevisiae Strain:S288C, industrial/model Saccharomyces cerevisiae Strain:Sigma1278b, industrial/model Saccharomyces kudriavzevii Saccharomyces mikatae Saccharomyces paradoxus Saccharomyces pastorianus Weihenstephan 34/70, industrial, beer Scheffersomyces stipitis CBS 6054, lignin/xylose degrader Spathaspora passalidarum NRRL Y-27907, model xylose fermenter Tetrapisispora phaffii van der Walt Y 89, CBS 4417 Torulaspora delbrueckii Strain:Wallerstein 129, CBS 1146 Vanderwaltozyma polyspora DSM 70294 Yarrowia lipolytica Strain:CLIB99, industrial use Zygosaccharomyces rouxii strain CBS732, food spoiler[Schizosaccharomycetes]
Schizosaccharomyces japonicus yFS275, model for invasive growth Schizosaccharomyces pombe Strain:972h, model eukaryote[Sordariomycetes]
Colletotrichum graminicola, corn pathogen Colletotrichum higginsianum, Arabidopsis thaliana pathogen Chaetomium cochliodes Strain:CCM F-232, soil fungus Chaetomium globosum Strain:CBS 148.51, soil fungus Chaetomium thermophilum Strain:CBS 144.50, soil fungus Fusarium oxysporum f. sp. lycopersici 4287, human/plant pathogen Gibberella moniliformis 7600, plant pathogen Gibberella zeae PH-1, plant pathogen Gaeumannomyces graminis tritici R3-111a-1 Grosmannia clavigera kw1407, plant pathogen Magnaporthe grisea, plant pathogen Metarhizium acridum CQMa 102, andMetarhizium anisopliae ARSEF 23, insect pathogens Neurospora crassa, model eukaryote Neurospora tetrasperma FGSC 2508 mat A, model Nectria haematococca MPVI, plastic/pest./lignin degrader Podospora anserina :S mat+Sporotrichum thermophile, thermophilic cellulose degrader Thielavia terrestris, model thermophile/industrial Trichoderma atroviride, industrial/soil, Trichoderma reesei QM6a, biomass-degrading Trichoderma virens Gv29-8, industrial/pathogen Verticillium albo-atrum VaMs.102, plant pathogen[Basidiomycota]
[Agaricomycetes]
Agaricus bisporus var. bisporus Strain:H97, Champignon- Agrocybe aegerita, ack Poplar or Sword-belt Mushroom Auricularia delicata
- Auricularia heimuer, Chinese Auricularia Coniophora puteana Coprinopsis cinerea, model organism for multicellular fungi Dichomitus squalens Fibroporia radiculosa Strain:TFFH 294 Fomitiporia mediterranea Fomitopsis pinicola Ganoderma leucocontextum strain:GL72 Gloeophyllum trabeum Hebeloma cylindrosporum http://genome.jgi.doe.gov/Hebcy2/Hebcy2.home.htmlHeterobasidion annosum, plant pathogen Laccaria bicolor Strain:S238N-H82, mycorrhiza
- Lentinula edodes, Shiitake mushroom Moniliophthora perniciosa, Witches' Broom Disease of cacao Oudemansiella raphanipes, edible mushroom "Changgengu"Phanerochaete chrysosporium Strain:RP78, mycoremediation Piriformospora indica endophyte Pleurotus ostreatus, industrial/lignin degrader
- Pleurotus tuber-regium, White-rot fungus
- Polyporus umbellatus - a well-known medicinal fungus in AsiaPostia placenta, cellulose degrader Punctularia strigosozonata Schizophyllum commune, mushroom Serpula lacrymans, plant pathogen Stereum hirsutum Trametes versicolor
- ''Wolfiporia cocos''
Dacrymycetes">Dacrymycetales">Dacrymycetes
Dacryopinax spathularia, edible jelly fungus[Pucciniomycetes] (formerly [Urediniomycetes])
Melampsora laricis-populina, pathogen of poplars Puccinia graminis f. sp. tritici, plant pathogen- Puccinia polysora f.sp. zeae - a giga-scale fungal pathogen causing southern corn rustPuccinia triticina 1-1 BBBD Race 1, pathogen of wheatRhodotorula graminis strain WP1, plant symbiont Sporobolomyces roseus, associated with plants
[Tremellomycetes]
Cryptococcus (Filobasidiella) neoformans JEC21, human pathogen Dacryopinax sp.[Ustilaginomycetes]
Malassezia globosa CBS 7966, dandruff-associated Malassezia restricta CBS 7877, dandruff-associated Sporisorium rellianum, plant pathogen Ustilago maydis, plant pathogen[Wallemiomycetes]
Wallemia ichthyophaga, obligate halophile Wallemia sebi, xerophile[Chytridiomycota]
Chytridiomycota includes fungi with spores that have flagella and are a sister group to more advanced land fungi that lack flagella. Several chytrid species are pathogens, but have not had their genomes sequenced yet.Batrachochytrium dendrobatidis JEL423, amphibian pathogen Batrachochytrium dendrobatidis JAM81, amphibian pathogen Spizellomyces punctatus DAOM BR117 Gonapodya prolifera JEL478- Chytriomyces sp. MP 71Entophlycits helioformis JEL805Gaertneriomyces semiglobifer Barr43Globomyces pollinis-pini
- ''Rhizoclomsatium globosum''
[Blastocladiomycota]
Allomyces macrogynus ATCC 38327 Catenaria anguillulae PL171[Neocallimastigomycota]
Piromyces sp. E2 Anaeromyces sp. S4 Neocallimastix sp. G1Orpinomyces sp. C1A[Microsporidia]
Encephalitozoon cuniculi, human pathogen Encephalitozoon intestinalis ATCC 50506, human pathogen Enterocytozoon bieneusi, human pathogen particularly in the context of HIV infection Nosema ceranae, honey bee pathogen Octosporea bayeri OER 3-3, Daphnia pathogen[Mucoromycota]
[Mucoromycotina]
- Absidia padenii
- Absidia repens
- Backusella circina
- Circinella umbellata
- Cokeromyces recurvatus
- Cunninghamella echinulata
- Dichotomocladium elegans
- Fennellomyces sp.
- Gilbertella persicaria var. persicaria
- Gongronella butleri
- Hesseltinella vesiculosa
- Lichtheimia corymbifera
- Lichtheimia hyalospora
- Mucor circinelloides
- Mucor cordense
- Mucor indicus
- Mucor heterogamus
- Mycotypha africana
- Parasitella parasitica
- Phascolomyces articulosus
- Phycomyces blakesleeanus
- Phycomyces nitens
- Pilaira anomala
- Pilobolus umbonatus
- Radiomyces spectabilis
- Rhizopus delemarRhizopus oryzae, human pathogen
- Rhizopus microsporus
- Saksenaea vasiformis
- Spinellus fuiger
- Sporodiniella umbellata
- Syncephalastrum racemosum
- Thamnidium elegans
- Umbelopsis isabellina
- Umbelopsis ramanniana
- ''Zychaea mexicana''
[Glomeromycotina]
[Mortierellomycotina]
Mortierella alpina Strain: ATCC 32222, commercial source of arachidonic acid- Lobosporangium transversale
- Mortierella elongata
- Mortierella humilis
- Mortierella multidivaricata
- ''Mortierella verticillata''
[Zoopagomycota]
[Kickxellomycotina]
- Coemansia reversa
- Coemansia spiralis
- Kickxella alabastrina
- Linderina pennicpora
- Martensiomyces pterosporus
- Ramicandelaber brevisporus
- Smittium culicis
- Smittium mucronatum
- ''Zancudomyces culisetae''
[Entomophthoromycotina]
- Basidiobolus meristosporus
- Conidiobolus coronatus
- Condidiobolus thromboides
- ''Massospora cicadina''
[Zoopagomycotina]
- Syncephalis fuscata
- Syncephalis plumigaleata
- Syncephalis pseudoplumigaleata
- ''Piptocephalis cylindrospora''