| Institute | Location |
| All India Institute of Medical Sciences | New Delhi, Nagpur, Bhopal, Bhubaneswar, Jodhpur, Patna, Raipur, Rishikesh, Bilaspur, Guwahati, Rajkot, Jammu, Deoghar, Kalyani, Bibinagar, Mangalagiri, Gorakhpur, Raebareli, Batinda |
| All India Institute of Speech and Hearing | Mysuru |
| Aryabhatta Research Institute of Observational Sciences | Nainital |
| Birbal Sahni Institute of Palaeobotany | Lucknow |
| Bose Institute | Kolkata |
| Central Drug Research Institute | Lucknow |
| Centre of Advanced Study in Botany | Varanasi |
| Centre for the Study of Developing Societies | Delhi |
| Centre for Development of Advanced Computing | Bengaluru, Chennai, Delhi, Hyderabad, Kolkata, Mohali, Mumbai, Noida, Patna, Pune, Silchar, Thiruvananthapura |
| Central Electronics Engineering Research Institute | Pilani |
| Central Food Technological Research Institute | Mysuru |
| Central Glass and Ceramic Research Institute | Kolkata |
| Central Mechanical Engineering Research Institute | Durgapur |
| Central Institute for Cotton Research | Nagpur |
| Central Institute of Agricultural Engineering | Bhopal |
| Central Institute of Brackish Water Aquaculture | Chennai |
| Central Institute of Educational Technology | New Delhi |
| Central Institute of Fisheries Education | Mumbai |
| Central Institute of Fisheries, Nautical and Engineering Training | Cochin |
| Central Institute of Fresh Water Aquaculture | Bhubaneswar |
| Central Institute of Indian Languages | Mysuru |
| Central Institute of Plastics Engineering and Technology | Chennai |
| Central Institute of Psychiatry | Ranchi |
| Central Institute of Medicinal and Aromatic Plants | Lucknow |
| Central Institute of Road Transport | Pune |
| Central Leather Research Institute | Chennai |
| Central Institute of Technology, Kokrajhar | Kokrajhar |
| Central Mine Planning and Design Institute Limited | Ranchi |
| Central Research Institute for Dryland Agriculture | Hyderabad |
| Central Sheep and Wool Research Institute | Avikanagar |
| Central Soil Salinity Research Institute | New Delhi |
| Centre for Cultural Resources and Training | New Delhi |
| Centre for Development Studies | Thiruvananthapuram |
| Centre for Excellence in Basic Sciences | Mumbai |
| College of Defence Management | Secunderabad |
| Deccan College Post-Graduate and Research Institute | Pune |
| ESIC Medical College and PGIMSR, Gulbarga | Kalaburagi |
| Film and Television Institute of India | Pune |
| Forest College and Research Institute (FCRI), Hyderabad | Hyderabad |
| FDDI | Hyderabad Telangana |
| Ghani Khan Chowdhury Institute of Engineering & Technology | Malda |
| Gandhigram Rural University | Dindigul |
| Harish Chandra Research Institute | Allahabad |
| Indian Agricultural Research Institute | New Delhi |
| Indian Association for the Cultivation of Science | Kolkata |
| Indian Diamond Institute | Surat |
| Indian Institute of Architects | Mumbai |
| Indian Institute of Astrophysics | Bengaluru |
| Indian Institute of Chemical Biology | Kolkata |
| Indian Institute of Chemical Technology | Hyderabad |
| Indian Institute of Coal Management | Ranchi |
| Indian Institute of Engineering Science and Technology | Shibpur |
| Indian Institute of Foreign Trade | New Delhi, Kolkata |
| Indian Institute of Forest Management | Bhopal |
| Indian Institute of Information Technology | Gwalior, Prayagraj, Dharwad, Agartala, Jabalpur, Kanchipuram, Kottayam, Kurnool, Guwahati, Nagpur, Bhopal, Pune, Raichur, Sri City, Surat, Vadodara, Ranchi, Kalyani, Lucknow, Una, Sonepat, Kota, Manipur, Bhagalpur, Tiruchirappalli |
| Indian Institute of Management | Amritsar, Ahmedabad, Bengaluru, Kolkata, Lucknow, Kozhikode, Indore, Shillong, Kashipur, Raipur, Ranchi, Rohtak, Trichy, Udaipur, Visakhapatnam, Sambalpur, Nagpur |
| Indian Institute of Information Technology and Management | Gwalior |
| Indian Institute of Mass Communication | Aizawl, Amravati, Dhenkanal, Jammu, Kottayam, New Delhi |
| Indian Institute of Petroleum | Dehradun |
| Indian Institute of Petroleum and Energy | Visakhapatnam |
| Indian Institute of Plantation Management | Bengaluru |
| Indian Institute of Pulses Research | Kanpur |
| Indian Institute of Remote Sensing | Dehradun |
| Indian Institute of Science | Bengaluru |
| Indian Institute of Science Education and Research | Kolkata, Pune, Mohali, Bhopal, Thiruvananthapuram, Tirupati, Berhampur |
| Indian Institute of Social Welfare and Business Management | Kolkata |
| Indian Institute of Soil Science | Bhopal |
| Indian Institute of Space Science and Technology | Thiruvananthapuram |
| Indian Institute of Spices Research | Calicut |
| Indian Institute of Technology | Kharagpur, Kanpur, Mumbai, Chennai, Delhi, (ISM), Dhanbad, Dharwad, Guwahati, Bhubaneswar, Roorkee, Ropar, Hyderabad, Gandhinagar, Jodhpur, Patna, Mandi, Indore, Tirupati, (BHU), Varanasi, Tirupati, Palakkad, Goa, Bhilai, Jammu |
| Indian Institute of Tourism and Travel Management | Gwalior, Nellore, Bhubaneswar, Noida, Goa, Bodh Gaya, Shillong |
| Indian Institute of Tropical Meteorology | Pune |
| Indian Institute of Natural Resins and Gums (Indian Lac Research Institute) | Ranchi |
| Indian Institute of Vegetable Research | Varanasi |
| Indian National Centre for Ocean Information Services | Hyderabad |
| Indian Maritime University | Chennai, Mumbai, Kolkata, Kochi, Visakhapatnam |
| Indian Statistical Institute | Kolkata, Bengaluru, Chennai, Delhi |
| Indian Veterinary Research Institute | Bareilly |
| Indira Gandhi Institute of Development Research | Mumbai |
| Indira Gandhi Centre for Atomic Research | Kalpakkam |
| Indira Gandhi National Forest Academy | Dehradun |
| Institute for Plasma Research | Gandhinagar |
| Institute for Studies in Industrial Development | New Delhi |
| Institute of Defence Studies and Analyses | New Delhi |
| Institute of Economic Growth | New Delhi |
| Institute of Food Security | Gurugram |
| Institute of Genomics and Integrative Biology | New Delhi |
| Institute of Hotel Management |
Delhi, Mumbai, Kolkata, Chennai, Bhubaneshwar, Goa, Jaipur, Shillong, Shimla, Guwahati, Gurdaspur, Bhopal, Srinagar, Chandigarh, Bengaluru, Gandhinagar, Gwalior, Hyderabad, Hajipur, Lucknow, Shimla, Kovalam. |
| Institute of Mathematical Sciences | Chennai |
| Institute of Physics | Bhubaneswar |
| Institute of Rural Management | Anand |
| Institute of Secretariat Training and Management | New Delhi |
| Institute for Studies in Industrial Development | New Delhi |
| International Institute for Population Sciences | Mumbai |
| Jawaharlal Institute of Postgraduate Medical Education & Research | Puducherry |
| Jawaharlal Nehru Centre for Advanced Scientific Research | Bengaluru |
| Jawaharlal Nehru Aluminium Research Development and Design Centre | Nagpur |
| King Institute of Preventive Medicine and Research | Chennai |
| Lady Hardinge Medical College | New Delhi |
| Lakshmibai National Institute of Physical Education | Gwalior |
| Malaviya Centre for Peace Research | Varanasi |
| Marine Engineering and Research Institute |
Kolkata |
| Maulana Abul Kalam Azad Institute of Asian Studies | Kolkata |
| Morarji Desai National Institute of Yoga | New Delhi |
| National Academy of Agricultural Research Management | Rajendranagar |
| National Academy of Agricultural Sciences | New Delhi |
| National Academy of Construction | Hyderabad |
| National Academy of Customs Excise and Narcotics | Kolkata, Hindupur |
| National Academy of Defence Production | Nagpur |
| National Botanical Research Institute | Lucknow |
| National Brain Research Centre | Manesar |
| National Centre for Polar and Ocean Research | Goa |
| National Civil Defence College | Nagpur |
| National Dairy Research Institute | Karnal |
| National Defence College of India | Delhi |
| National Environmental Engineering Research Institute | Nagpur |
| National Forensic Sciences University | Gandhinagar, Delhi, Ponda, Agartala |
| National Institute of Advanced Manufacturing Technology | Ranchi |
| National Institute for Micro, Small and Medium Enterprises | Hyderabad |
| National Institute of Agricultural Extension Management | Hyderabad |
| National Institute of Agricultural Marketing | Jaipur |
| National Institute of Animal Welfare | - |
| National Institute of Construction Management and Research | Mumbai |
| National Institute of Design | Ahmedabad, Bangalore, Hyderabad, Kurukshetra, Jorhat, Bhopal, Vijayawada |
| National Institute of Disaster Management | New Delhi |
| National Institute of Electronics & Information Technology | Ajmer, Agartala, Aizawl, Aurangabad, Calicut, Chennai, Chandigarh, Delhi, Gorakhpur, Gangtok, Guwahati, Imphal, Itanagar, Jammu, Kohima. Kolkata. Leh, Lucknow, Patna, Ranchi, Shillong, Srinagar, Tezpur |
| National Institute of Fashion Technology | Bangalore, Bhopal, Bhubaneswar, Chennai, Gandhinagar, Hyderabad, Jodhpur, Kangra, Kannur, Kolkata, Mumbai, Patna, Raebareli, Shillong |
| National Institute of Homoeopathy | Kolkata |
| National Institute of Hydrology | Belgavi, Roorkee |
| National Institute of Industrial Engineering | Mumbai |
| National Institute of Interdisciplinary Science and Technology | Thiruvananthapuram |
| National Institute of Malaria Research | Delhi, Haridwar, Guwahati, Nadiad, Raipur, Ranchi, Rourkela, Goa, Bengaluru, Chennai |
| National Institute of Mental Health and Neurosciences | Bengaluru |
| National Institute of Miners Health (NIMH) | Nagpur |
| National Institute of Nutrition | Hyderabad |
| National Institute of Open Schooling | Noida |
| National Institute of Oceanography | Goa, Kochi, Mumbai, Visakhapatnam |
| National Institute of Ocean Technology | Chennai, Nellore |
| National Institute of Public Finance and Policy | New Delhi |
| National Institute of Pharmaceutical Education and Research | Mohali, Ahmedabad, Raebareli, Hyderabad, Guwahati, Hajipur, Kolkata |
| National Institute of Rural Development | Hyderabad |
| National Institute of Science Communication and Information Resources | New Delhi |
| National Institute of Science Communication and Information Resources | Delhi |
| National Institute of Science Education and Research | Bhubaneswar |
| National Institute of Securities Markets | Navi Mumbai |
| National Seed Research and Training Centre | Varanasi |
| National Institute Of Technical Teachers Training and Research | Bhopal, Chandigarh, Chennai and Kolkata |
| National Institute of Technology | Agartala, Aizawl, Prayagraj, Bhopal, Chümoukedima, Durgapur, Goa, Hamirpur, Imphal, Jaipur, Jalandhar, Jamshedpur, Karaikal, Calicut, Kurukshetra, Nagpur, New Delhi, Patna, Raipur, Sikkim, Rourkela, Shillong, Silchar, Srinagar, Surat, Surathkal, Trichy, Tadepalligudem, Warangal, Yupia |
| National Institute of Urban Affairs | New Delhi |
| National Institute of Water Sports | Goa |
| National Museum Institute of the History of Art, Conservation and Museology (NMIHACM) | New Delhi |
| National Power Training Institute | Faridabad |
| National Sugar Institute | Kanpur |
| National Tuberculosis Institute | Bengaluru |
| National Institute of Homoeopathy | Kolkata |
| Netaji Subhas National Institute of Sports | Patiala |
| North Eastern Regional Institute of Science and Technology | Itanagar |
| Pandit Deendayal Upadhyaya Institute of Archaeology | Greater Noida |
| Physical Research Laboratory | Ahmedabad |
| Punjab Engineering College | Chandigarh |
| Raman Research Institute | Bengaluru |
| Rajiv Gandhi National Institute of Intellectual Property Management | Nagpur |
| Rajiv Gandhi Institute of Petroleum Technology | Rae Bareli |
| Rashtriya Raksha University | Gandhinagar |
| Saha Institute of Nuclear Physics | Kolkata |
| Sanjay Gandhi Postgraduate Institute of Medical Sciences | Lucknow |
| Sant Longowal Institute of Engineering and Technology (SLIET) | Sangrur |
| Satyajit Ray Film and Television Institute | Kolkata |
| S.N. Bose National Centre for Basic Sciences | Kolkata |
| School of Planning and Architecture | Vijayawada, Bhopal, Delhi |
| Sushma Swaraj Institute of Foreign Service | New Delhi |
| Tata Institute of Fundamental Research | Mumbai, Hyderabad |
| Tata Institute of Social Sciences | Mumbai, Hyderabad, Guwahati, Tuljapur |
| V. V. Giri National Labour Institute | New Delhi |
| Variable Energy Cyclotron Center | Kolkata |