1938–39 Panhellenic Championship
The 1938–39 Panhellenic Championship was the tenth season of the highest football league of Greece. 14 teams participated, for the first time so many and for the first time from the province. It was held in two groups, South Group with 8 and [|North Group] with 6 teams, which qualified from the championships of the local associations.
The South Group comprised club of Athens' and Piraeus' associations and resulted as follows:
- Athenian Championship: The first 5 teams of the ranking.
- Piraeus' Championship: The first 3 teams of the ranking.
- Macedonian Championship: The first 3 teams of the ranking.
- East Macedonian Championship: The first 3 teams of the ranking.
Since 26 matchdays were required to complete the championship, it was decided that the clubs from the same region that were qualified for the national championship would not face each other again, but the results from their local championships would apply instead. From this period, the HFF established a point system of 3-2-1 in all competitions, so that there was the ability of zeroing any team that refused to take part in a match. That system would eventually be applied until the 1972–73 season.
Qualification round
Athens Football Clubs Association
Piraeus Football Clubs Association
Macedonia Football Clubs Association
| Team | Qualification | ||||||
| 1 | Iraklis ' | 10 | 28 | 10 | +18 | 27 | North Group |
| 2 | Aris ' | 10 | 35 | 10 | +25 | 26 | North Group |
| 3 | PAOK | 10 | 28 | 13 | +15 | 23 | North Group |
| 4 | Makedonikos | 10 | 16 | 18 | -2 | 18 | |
| 5 | MENT | 10 | 16 | 28 | -12 | 16 | |
| 6 | Aetos Papafi | 10 | 8 | 52 | -44 | 10 |
Semi-final round
South Group
Finals
Matches
''AEK Athens won 7–3 on aggregate.''Top scorers
| Rank | Player | Club | Goals |
| 1 |  |colonial |