Mass spectrometry imaging


Mass spectrometry imaging is a technique used in mass spectrometry to visualize the spatial distribution of molecules, as biomarkers, metabolites, peptides or proteins by their molecular masses. After collecting a mass spectrum at one spot, the sample is moved to reach another region, and so on, until the entire sample is scanned. By choosing a peak in the resulting spectra that corresponds to the compound of interest, the MS data is used to map its distribution across the sample. This results in pictures of the spatially resolved distribution of a compound pixel by pixel. Each data set contains a veritable gallery of pictures because any peak in each spectrum can be spatially mapped. Despite the fact that MSI has been generally considered a qualitative method, the signal generated by this technique is proportional to the relative abundance of the analyte. Therefore, quantification is possible, when its challenges are overcome. Although widely used traditional methodologies like radiochemistry and immunohistochemistry achieve the same goal as MSI, they are limited in their abilities to analyze multiple samples at once, and can prove to be lacking if researchers do not have prior knowledge of the samples being studied. Most common ionization technologies in the field of MSI are DESI imaging, MALDI imaging, secondary ion mass spectrometry imaging and Nanoscale SIMS.

History

More than 50 years ago, MSI was introduced using secondary ion mass spectrometry to study semiconductor surfaces by Castaing and Slodzian. However, it was the pioneering work of Richard Caprioli and colleagues in the late 1990s, demonstrating how matrix-assisted laser desorption/ionization could be applied to visualize large biomolecules in cells and tissue to reveal the function of these molecules and how function is changed by diseases like cancer, which led to the widespread use of MSI. Nowadays, different ionization techniques have been used, including SIMS, MALDI and desorption electrospray ionization, as well as other technologies. Still, MALDI is the current dominant technology with regard to clinical and biological applications of MSI.

Operation principle

The MSI is based on the spatial distribution of the sample. Therefore, the operation principle depends on the technique that is used to obtain the spatial information. The two techniques used in MSI are: microprobe and microscope.

Microprobe

This technique is performed using a focused ionization beam to analyze a specific region of the sample by generating a mass spectrum. The mass spectrum is stored along with the spatial coordination where the measurement took place. Then, a new region is selected and analyzed by moving the sample or the ionization beam. These steps are repeated until the entire sample has been scanned. By coupling all individual mass spectra, a distribution map of intensities as a function of x and y locations can be plotted. As a result, reconstructed molecular images of the sample are obtained.

Microscope

In this technique, a 2D position-sensitive detector is used to measure the spatial origin of the ions generated at the sample surface by the ion optics of the instruments. The resolution of the spatial information will depend on the magnification of the microscope, the quality of the ions optics and the sensitivity of the detector. A new region still needs to be scanned, but the number of positions drastically reduces. The limitation of this mode is the finite depth of vision present with all microscopes.

Ion source dependence

The ionization techniques available for MSI are suited to different applications. Some of the criteria for choosing the ionization method are the sample preparation requirement and the parameters of the measurement, as resolution, mass range and sensitivity. Based on that, the most common used ionization method are MALDI, SIMS AND DESI which are described below. Still, other minor techniques used are laser ablation electrospray ionization, laser-ablation-inductively coupled plasma and nanospray desorption electrospray ionization.

SIMS and NanoSIMS imaging

is used to analyze solid surfaces and thin films by sputtering the surface with a focused primary ion beam and collecting and analyzing ejected secondary ions. There are many different sources for a primary ion beam. However, the primary ion beam must contain ions that are at the higher end of the energy scale. Some common sources are: Cs+, O2+, O, Ar+ and Ga+. SIMS imaging is performed in a manner similar to electron microscopy; the primary ion beam is emitted across the sample while secondary mass spectra are recorded. SIMS proves to be advantageous in providing the highest image resolution but only over small area of samples. More, this technique is widely regarded as one of the most sensitive forms of mass spectrometry as it can detect elements in concentrations as small as 1012-1016 atoms per cubic centimeter.
Multiplexed ion beam imaging is a SIMS method that uses metal isotope labeled antibodies to label compounds in biological samples.
Developments within SIMS: Some chemical modifications have been made within SIMS to increase the efficiency of the process. There are currently two separate techniques being used to help increase the overall efficiency by increasing the sensitivity of SIMS measurements: matrix-enhanced SIMS - This has the same sample preparation as MALDI does as this simulates the chemical ionization properties of MALDI. ME-SIMS does not sample nearly as much material. However, if the analyte being tested has a low mass value then it can produce a similar looking spectra to that of a MALDI spectra. ME-SIMS has been so effective that it has been able to detect low mass chemicals at sub cellular levels that was not possible prior to the development of the ME-SIMS technique. The second technique being used is called sample metallization - This is the process of gold or silver addition to the sample. This forms a layer of gold or silver around the sample and it is normally no more than 1-3 nm thick. Using this technique has resulted in an increase of sensitivity for larger mass samples. The addition of the metallic layer also allows for the conversion of insulating samples to conducting samples, thus charge compensation within SIMS experiments is no longer required.
Subcellular resolution is enabled by NanoSIMS allowing for absolute quantitative analysis at the organelle level.

MALDI imaging

can be used as a mass spectrometry imaging technique for relatively large molecules. It has recently been shown that the most effective type of matrix to use is an ionic matrix for MALDI imaging of tissue. In this version of the technique the sample, typically a thin tissue section, is moved in two dimensions while the mass spectrum is recorded. Although MALDI has the benefit of being able to record the spatial distribution of larger molecules, it comes at the cost of lower resolution than the SIMS technique. The limit for the lateral resolution for most of the modern instruments using MALDI is 20 m. MALDI experiments commonly use either an Nd:YAG or N2 laser for ionization.
Pharmacodynamics and toxicodynamics in tissue have been studied by MALDI imaging.

DESI imaging

Desorption electrospray Ionization is a less destructive technique, which couples simplicity and rapid analysis of the sample. The sample is sprayed with an electrically charged solvent mist at an angle that causes the ionization and desorption of various molecular species. Then, two-dimensional maps of the abundance of the selected ions in the surface of the sample in relation with the spatial distribution are generated. This technique is applicable to solid, liquid, frozen and gaseous samples. Moreover, DESI allows analyzing a wide range of organic and biological compounds, as animal and plant tissues and cell culture samples, without complex sample preparation Although, this technique has the poorest resolution among other, it can create high-quality image from a large area scan, as a whole body section scanning.
Nano-DESI imaging
Nanospray Desoprtion Electrospray Ionization is a minimally destructive soft ionization technique based on liquid extraction. The basic setup consists of two fused silica cpaillaries. An extraction solvent is supplied through primary capillary, forming a liquid bridge at the interface of the two capillaries and extracting molecules from the tissue surface. Afterwards, the extracted analytes are getting propelled through the secondary capillary inside the inlet of a mass spectrometer. Nano-DESI offers great solvent versatility and possibility for analyte quantification with introduction of internal standards directly into the solvent.

SICRIT imaging

The Soft Ionization by Chemical Reaction in Transfer source can be coupled with imaging techniques such as Atmospheric pressure -MALDI or laser ablation. In AP-MALDI + SICRIT configurations, SICRIT serves as an ambient-pressure post-ionization unit, increasing ion yield and extending molecular coverage, particularly for small metabolites and lipids. When combined with laser ablation, SICRIT enables soft ionization of ablated neutrals without matrix application, maintaining high spatial resolution down to ~1 µm. Recent studies demonstrate that coupling laser desorption with plasma-based SICRIT ionization improves ionization efficiency and signal stability under atmospheric conditions. The technique offers compatibility with various mass spectrometers and minimal sample preparation. Limitations include dependence on ablation parameters and limited coverage of large biomolecules. SICRIT imaging is an emerging approach promising enhanced molecular coverage and flexible ambient-MSI workflows.

Comparative between the ionization techniques